Detailed information of Aala_g635.t1 in Alatina alata

Genomic Location: :...
NR annotation: RMX56253.1, hypothetical protein pdam_00011678, partial [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P33450Cadherin-related tumor suppressor OS=Drosophila melanogaster OX=7227 GN=ft PE=1 SV=3
Q5DRA7Protocadherin gamma-B5 OS=Pan troglodytes OX=9598 GN=PCDHGB5 PE=3 SV=1
Q5DRB4Protocadherin gamma-A6 OS=Pan troglodytes OX=9598 GN=PCDHGA6 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR053164FamilyIS1016-like transposaseInterproscan
IPR029069Homologous_superfamilyHotDog domain superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR47163DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEINInterproscan
PTHR24026FAT ATYPICAL CADHERIN-RELATEDInterproscan
PTHR44927FK506-BINDING PROTEIN 15Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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