Gene detail

Detailed information of Aala_g637.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_029206891.2, uncharacterized protein LOC114970592 [Acropora millepora]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
A0JMY5	NF-X1-type zinc finger protein NFXL1 OS=Xenopus laevis OX=8355 GN=nfxl1 PE=2 SV=1
Q9FFK8	NF-X1-type zinc finger protein NFXL2 OS=Arabidopsis thaliana OX=3702 GN=NFXL2 PE=1 SV=2
P10978	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-NF-X1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02415	Chlam_PMP	Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat	Repeat	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF07727	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan
PF14244	Retrotran_gag_3	gag-polypeptide of LTR copia-type	Family	Interproscan
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003368	Repeat	Polymorphic outer membrane protein repeat	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR013103	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan
IPR029472	Domain	Retrotransposon Copia-like, N-terminal	Interproscan
IPR052510	Family	Oomycete RxLR Effector	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR034078	Family	Transcription factor NFX1 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR45895	INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR46954	C2H2-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR12360	NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan