Detailed information of Aala_g644.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_040948648.1, uncharacterized protein LOC121217177 [Gossypium hirsutum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P10401Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00755Carn_acyltransfCholine/Carnitine o-acyltransferaseFamilyInterproscan
PF07522DRMBLDNA repair metallo-beta-lactamaseDomainInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR042231Homologous_superfamilyCholine/Carnitine o-acyltransferase, domain 2Interproscan
IPR039551DomainCholine/carnitine acyltransferase domainInterproscan
IPR000542FamilyAcyltransferase ChoActase/COT/CPTInterproscan
IPR011084DomainDNA repair metallo-beta-lactamaseInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR042496FamilyCell growth regulator with RING finger domain protein 1Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan
PTHR38681RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR22589CARNITINE O-ACYLTRANSFERASEInterproscan
PTHR23240DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATEDInterproscan
PTHR15379CELL GROWTH REGULATOR WITH RING FINGER DOMAIN PROTEIN 1Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007508Biological Processlarval heart developmentInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0061343Biological Processcell adhesion involved in heart morphogenesisInterproscan
GO:0004095Molecular Functioncarnitine O-palmitoyltransferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006631Biological Processfatty acid metabolic processInterproscan
GO:0009437Biological Processcarnitine metabolic processInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0035312Molecular Function5'-3' DNA exonuclease activityInterproscan
GO:0036297Biological Processinterstrand cross-link repairInterproscan
GO:0030308Biological Processnegative regulation of cell growthInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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