Detailed information of Aala_g657.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCH2406050.1, reverse transcriptase family protein [Nitrosopumilus sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P08548LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00626GelsolinGelsolin repeatDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00203Ribosomal_S19Ribosomal protein S19DomainInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF14214Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan
PF14893PNMAPNMAFamilyInterproscan
PF00241Cofilin_ADFCofilin/tropomyosin-type actin-binding proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029006Homologous_superfamilyADF-H/Gelsolin-like domain superfamilyInterproscan
IPR007123DomainGelsolin-like domainInterproscan
IPR007122FamilyVillin/GelsolinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR002222FamilySmall ribosomal subunit protein uS19Interproscan
IPR023575Homologous_superfamilySmall ribosomal subunit protein uS19, superfamilyInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR000998DomainMAM domainInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR025476DomainHelitron helicase-like domainInterproscan
IPR048270DomainParaneoplastic antigen Ma-like, C-terminal domainInterproscan
IPR026523FamilyParaneoplastic antigen MaInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR017904FamilyADF/CofilinInterproscan
IPR002108DomainActin-depolymerising factor homology domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11977VILLINInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11880RIBOSOMAL PROTEIN S19P FAMILY MEMBERInterproscan
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR45786DNA BINDING PROTEIN-LIKEInterproscan
PTHR23095PARANEOPLASTIC ANTIGENInterproscan
PTHR11913COFILIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005546Molecular Functionphosphatidylinositol-4,5-bisphosphate bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008154Biological Processactin polymerization or depolymerizationInterproscan
GO:0015629Cellular Componentactin cytoskeletonInterproscan
GO:0030239Biological Processmyofibril assemblyInterproscan
GO:0051014Biological Processactin filament severingInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0051016Biological Processbarbed-end actin filament cappingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0000028Biological Processribosomal small subunit assemblyInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0030042Biological Processactin filament depolymerizationInterproscan
GO:0030479Cellular Componentactin cortical patchInterproscan
GO:0003779Molecular Functionactin bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02958RP-S15e, RPS15; small subunit ribosomal protein S15e-Ribosomeko03011deepkoala

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