Detailed information of Aala_g666.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAI9621542.1, unnamed protein product [Staurois parvus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q04462Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars1 PE=2 SV=2
Q9Z1Q9Valine--tRNA ligase OS=Mus musculus OX=10090 GN=Vars1 PE=1 SV=1
P26640Valine--tRNA ligase OS=Homo sapiens OX=9606 GN=VARS1 PE=1 SV=4
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13414TPR_11TPR repeatRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF04086SRP-alpha_NSignal recognition particle, alpha subunit, N-terminalFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF05729NACHTNACHT domainDomainInterproscan
PF04091Sec15_CExocyst complex subunit Sec15 C-terminalRepeatInterproscan
PF08264Anticodon_1Anticodon-binding domain of tRNA ligaseDomainInterproscan
PF01436NHLNHL repeatRepeatInterproscan
PF17170DUF51286-bladed beta-propellerRepeatInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR050498FamilyPhotosystem I assembly protein Ycf3Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR007222DomainSignal recognition particle receptor, alpha subunit, N-terminalInterproscan
IPR011012Homologous_superfamilyLongin-like domain superfamilyInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR011044Homologous_superfamilyQuinoprotein amine dehydrogenase, beta chain-likeInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR052752FamilyNACHT and WD repeat domain-containing proteinInterproscan
IPR042044Homologous_superfamilyEXOC6/PINT-1/Sec15/Tip20, C-terminal, domain 2Interproscan
IPR046361DomainExocyst complex subunit EXOC6/Sec15, C-terminalInterproscan
IPR007225FamilyExocyst complex component EXOC6/Sec15Interproscan
IPR002303FamilyValine-tRNA ligaseInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR013155DomainMethionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR050952FamilyTripartite Motif and NHL Repeat Containing E3 LigasesInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR051417FamilySerine-Aspartate Repeat-ContainingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44858TETRATRICOPEPTIDE REPEAT PROTEIN 6Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR19871BETA TRANSDUCIN-RELATED PROTEINInterproscan
PTHR12702SEC15Interproscan
PTHR11946VALYL-TRNA SYNTHETASESInterproscan
PTHR24104E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATEDInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45786DNA BINDING PROTEIN-LIKEInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23303CARBOXYPEPTIDASE REGULATORY REGION-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005047Molecular Functionsignal recognition particle bindingInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005785Cellular Componentsignal recognition particle receptor complexInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0000145Cellular ComponentexocystInterproscan
GO:0006887Biological ProcessexocytosisInterproscan
GO:0006893Biological ProcessGolgi to plasma membrane transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0090522Biological Processvesicle tethering involved in exocytosisInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004832Molecular Functionvaline-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006438Biological Processvalyl-tRNA aminoacylationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24642ZBED5_7_8_9, BUSTER; zinc finger BED domain-containing protein 5/7/8/9-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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