Detailed information of Aala_g669.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCH9665805.1, hypothetical protein [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7LHG5Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2
Q99315Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3
P10394Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18437Nup54_CNup54 C-terminal interacting domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00067p450Cytochrome P450DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040985DomainNup54, C-terminal interacting domainInterproscan
IPR024864FamilyNucleoporin Nup54/Nup57/Nup44Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR001128FamilyCytochrome P450Interproscan
IPR050479FamilyCytochrome P450, families 11 and 27Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13000NUCLEOPORIN P54Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24279-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006607Biological ProcessNLS-bearing protein import into nucleusInterproscan
GO:0006999Biological Processnuclear pore organizationInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0036228Biological Processprotein localization to nuclear inner membraneInterproscan
GO:0044613Cellular Componentnuclear pore central transport channelInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0020037Molecular Functionheme bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K27629CNGC17; cyclic nucleotide gated channel 17-Replication and repair-deepkoala
Ion channelsko04040deepkoala

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