Detailed information of Aala_g672.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAJ8019329.1, hypothetical protein HOLleu_42129 [Holothuria leucospilota]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P79202Cholesterol side-chain cleavage enzyme, mitochondrial OS=Ovis aries OX=9940 GN=CYP11A1 PE=1 SV=1
Q02318Sterol 26-hydroxylase, mitochondrial OS=Homo sapiens OX=9606 GN=CYP27A1 PE=1 SV=1
P17178Sterol 26-hydroxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cyp27a1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF14828AmnionlessAmnionlessFamilyInterproscan
PF04992RNA_pol_Rpb1_6RNA polymerase Rpb1, domain 6DomainInterproscan
PF04998RNA_pol_Rpb1_5RNA polymerase Rpb1, domain 5DomainInterproscan
PF04983RNA_pol_Rpb1_3RNA polymerase Rpb1, domain 3DomainInterproscan
PF05000RNA_pol_Rpb1_4RNA polymerase Rpb1, domain 4DomainInterproscan
PF04990RNA_pol_Rpb1_7RNA polymerase Rpb1, domain 7DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00067p450Cytochrome P450DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR026112FamilyAmnionlessInterproscan
IPR038593Homologous_superfamilyRNA polymerase Rpb1, domain 7 superfamilyInterproscan
IPR038120Homologous_superfamilyRNA polymerase Rpb1, funnel domain superfamilyInterproscan
IPR007075DomainRNA polymerase Rpb1, domain 6Interproscan
IPR007081DomainRNA polymerase Rpb1, domain 5Interproscan
IPR007066DomainRNA polymerase Rpb1, domain 3Interproscan
IPR007083DomainRNA polymerase Rpb1, domain 4Interproscan
IPR007073DomainRNA polymerase Rpb1, domain 7Interproscan
IPR042102Homologous_superfamilyRNA polymerase Rpb1, domain 3 superfamilyInterproscan
IPR045867FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR001128FamilyCytochrome P450Interproscan
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR050479FamilyCytochrome P450, families 11 and 27Interproscan
IPR017972Conserved_siteCytochrome P450, conserved siteInterproscan
IPR002401FamilyCytochrome P450, E-class, group IInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR14995AMNIONLESSInterproscan
PTHR37162HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR19376DNA-DIRECTED RNA POLYMERASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47202HISTIDINE-RICH GLYCOPROTEINInterproscan
PTHR24279-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006898Biological Processreceptor-mediated endocytosisInterproscan
GO:0008104Biological Processprotein localizationInterproscan
GO:0016324Cellular Componentapical plasma membraneInterproscan
GO:0030139Cellular Componentendocytic vesicleInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0001055Molecular FunctionRNA polymerase II activityInterproscan
GO:0005665Cellular ComponentRNA polymerase II, core complexInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0005743Cellular Componentmitochondrial inner membraneInterproscan
GO:0006700Biological ProcessC21-steroid hormone biosynthetic processInterproscan
GO:0006704Biological Processglucocorticoid biosynthetic processInterproscan
GO:0008203Biological Processcholesterol metabolic processInterproscan
GO:0034650Biological Processcortisol metabolic processInterproscan
GO:0071375Biological Processcellular response to peptide hormone stimulusInterproscan

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