Detailed information of Aala_g682.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_031558188.1, protein sidekick-2-like, partial [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
F4J6T7Putative alpha-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=XYL2 PE=5 SV=1
Q60847Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3
Q99715Collagen alpha-1(XII) chain OS=Homo sapiens OX=9606 GN=COL12A1 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyPC4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01130CD36CD36 familyFamilyInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF02229PC4Transcriptional Coactivator p15 (PC4)DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR002159FamilyCD36 familyInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR009044Homologous_superfamilyssDNA-binding transcriptional regulatorInterproscan
IPR045125FamilyRNA polymerase II transcriptional coactivator Sub1/Tcp4-likeInterproscan
IPR003173DomainTranscriptional coactivator p15 (PC4), C-terminalInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR013099DomainPotassium channel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11923SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1Interproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR24020COLLAGEN ALPHAInterproscan
PTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR11537VOLTAGE-GATED POTASSIUM CHANNELInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0005044Molecular Functionscavenger receptor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0060261Biological Processpositive regulation of transcription initiation by RNA polymerase IIInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0005251Molecular Functiondelayed rectifier potassium channel activityInterproscan
GO:0008076Cellular Componentvoltage-gated potassium channel complexInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan

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