Detailed information of Aala_g684.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH1249728.1, Hypp8672 [Branchiostoma lanceolatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O02751Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
Q588U8Craniofacial development protein 2 OS=Tragulus javanicus OX=9849 GN=CFDP2 PE=2 SV=1
A0A0R4ITC5Transformation/transcription domain-associated protein OS=Danio rerio OX=7955 GN=trrap PE=3 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF13877RPAP3_CPotential Monad-binding region of RPAP3DomainInterproscan
PF15867Dynein_attach_NDynein attachment factor N-terminusFamilyInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF12874zf-metZinc-finger of C2H2 typeDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF20206Tra1_ringTra1 HEAT repeat ring regionRepeatInterproscan
PF13456RVT_3Reverse transcriptase-likeDomainInterproscan
PF03175DNA_pol_B_2DNA polymerase type B, organellar and viralFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR025986DomainRNA-polymerase II-associated protein 3-like, C-terminal domainInterproscan
IPR042422FamilyCoiled-coil domain-containing protein 103Interproscan
IPR031733DomainDynein attachment factor, N-terminalInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR026516FamilyTHAP domain-containing protein 1/10Interproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR046805RepeatTra1, HEAT repeat ring regionInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR002156DomainRibonuclease H domainInterproscan
IPR029052Homologous_superfamilyMetallo-dependent phosphatase-likeInterproscan
IPR004868DomainDNA-directed DNA polymerase, family B, mitochondria/virusInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR28572COILED-COIL DOMAIN-CONTAINING PROTEIN 103Interproscan
PTHR35317OS04G0629600 PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46600THAP DOMAIN-CONTAININGInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10340SPHINGOMYELIN PHOSPHODIESTERASEInterproscan
PTHR31511PROTEIN CBG23764Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003351Biological Processepithelial cilium movement involved in extracellular fluid movementInterproscan
GO:0007368Biological Processdetermination of left/right symmetryInterproscan
GO:0036157Cellular Componentouter dynein armInterproscan
GO:0036159Biological Processinner dynein arm assemblyInterproscan
GO:0070286Biological Processaxonemal dynein complex assemblyInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0008081Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16583TTLL7; tubulin polyglutamylase TTLL7EC:6.3.2.62
Transfer RNA biogenesisko03016deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala
Cytoskeleton proteinsko04812deepkoala

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