Detailed information of Aala_g69.t1 in Alatina alata

Genomic Location: :...
NR annotation: GFO45433.1, RNA-directed DNA polymerase from mobile element jockey [Plakobranchus ocellatus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q86YR7Probable guanine nucleotide exchange factor MCF2L2 OS=Homo sapiens OX=9606 GN=MCF2L2 PE=1 SV=3
A4IHD2Helicase ARIP4 OS=Xenopus tropicalis OX=8364 GN=rad54l2 PE=2 SV=1
Q99NG0Helicase ARIP4 OS=Mus musculus OX=10090 GN=Rad54l2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01642MM_CoA_mutaseMethylmalonyl-CoA mutaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051336FamilyRho GTPase-activating Guanine Nucleotide Exchange FactorsInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR050149FamilyCollagen superfamilyInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR044574FamilyATPase ARIP4-likeInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR006099DomainMethylmalonyl-CoA mutase, alpha/beta chain, catalyticInterproscan
IPR006098DomainMethylmalonyl-CoA mutase, alpha chain, catalyticInterproscan
IPR016176Homologous_superfamilyCobalamin (vitamin B12)-dependent enzyme, catalyticInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22826RHO GUANINE EXCHANGE FACTOR-RELATEDInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR24023COLLAGEN ALPHAInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR45797RAD54-LIKEInterproscan
PTHR48101METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0030020Molecular Functionextracellular matrix structural constituent conferring tensile strengthInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0016866Molecular Functionintramolecular transferase activityInterproscan
GO:0031419Molecular Functioncobalamin bindingInterproscan
GO:0004494Molecular Functionmethylmalonyl-CoA mutase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0019678Biological Processpropionate metabolic process, methylmalonyl pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13784PTMA; prothymosin alpha-Others-deepkoala

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