Detailed information of Aala_g696.t1 in Alatina alata

Genomic Location: :...
NR annotation: PNJ07430.1, RBPJ isoform 19, partial [Pongo abelii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5RFK6Recombining binding protein suppressor of hairless OS=Pongo abelii OX=9601 GN=RBPJ PE=2 SV=1
Q3SZ41Recombining binding protein suppressor of hairless OS=Bos taurus OX=9913 GN=RBPJ PE=2 SV=1
Q06330Recombining binding protein suppressor of hairless OS=Homo sapiens OX=9606 GN=RBPJ PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16183Kinesin_assocKinesin-associatedFamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF09271LAG1-DNAbindLAG1, DNA bindingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000358FamilyRibonucleotide reductase small subunit familyInterproscan
IPR032405DomainKinesin-associatedInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR040159FamilySuppressor of hairless-likeInterproscan
IPR037095Homologous_superfamilyRBP-J/Cbf11, DNA binding domain superfamilyInterproscan
IPR015351DomainRBP-J/Cbf11/Cbf12, DNA bindingInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR031160DomainF-BAR domainInterproscan
IPR005819FamilyLinker histone H1/H5Interproscan
IPR009008Homologous_superfamilyValyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainInterproscan
IPR004493FamilyLeucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolicInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23409RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAINInterproscan
PTHR47117STAR-RELATED LIPID TRANSFER PROTEIN 9Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR10665RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESSInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45794LEUCYL-TRNA SYNTHETASEInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004748Molecular Functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptorInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0009263Biological Processdeoxyribonucleotide biosynthetic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001228Molecular FunctionDNA-binding transcription activator activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004823Molecular Functionleucine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006429Biological Processleucyl-tRNA aminoacylationInterproscan

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