Gene detail

Detailed information of Aala_g712.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_047144755.1, uncharacterized protein LOC124818240 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P15170	Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens OX=9606 GN=GSPT1 PE=1 SV=1
Q5R4B3	Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii OX=9601 GN=GSPT2 PE=2 SV=1
Q149F3	Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus OX=10090 GN=Gspt2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00665	rve	Integrase core domain	Domain	Interproscan
PF07727	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF18266	Ncstrn_small	Nicastrin small lobe	Domain	Interproscan
PF05450	Nicastrin	Nicastrin	Family	Interproscan
PF00028	Cadherin	Cadherin domain	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR013103	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan
IPR052035	Family	Zinc finger BED domain-containing	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR051573	Family	Ankyrin repeat and SOCS box domain-containing protein	Interproscan
IPR008710	Family	Nicastrin	Interproscan
IPR041084	Domain	Nicastrin, small lobe	Interproscan
IPR050971	Family	Cadherin domain-containing protein	Interproscan
IPR002126	Domain	Cadherin-like	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR020894	Conserved_site	Cadherin conserved site	Interproscan
IPR015919	Homologous_superfamily	Cadherin-like superfamily	Interproscan
IPR009000	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR050100	Family	Translation factor GTPase superfamily members	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42648	TRANSPOSASE, PUTATIVE-RELATED	Interproscan
PTHR46481	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4	Interproscan
PTHR24136	SOWAH (DROSOPHILA) HOMOLOG	Interproscan
PTHR46022	PROTEIN PATCHED	Interproscan
PTHR21092	NICASTRIN	Interproscan
PTHR24025	DESMOGLEIN FAMILY MEMBER	Interproscan
PTHR23115	TRANSLATION FACTOR	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0045732	Biological Process	positive regulation of protein catabolic process	Interproscan
GO:0005119	Molecular Function	smoothened binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0008158	Molecular Function	hedgehog receptor activity	Interproscan
GO:0045879	Biological Process	negative regulation of smoothened signaling pathway	Interproscan
GO:0097108	Molecular Function	hedgehog family protein binding	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016485	Biological Process	protein processing	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005911	Cellular Component	cell-cell junction	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0003747	Molecular Function	translation release factor activity	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0018444	Cellular Component	translation release factor complex	Interproscan