Detailed information of Aala_g724.t1 in Alatina alata

Genomic Location: :...
NR annotation: GFR89208.1, endonuclease-reverse transcriptase [Elysia marginata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P04146Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
Q94HW2Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF20049DUF6451Domain of unknown function (DUF6451)DomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF00102Y_phosphataseProtein-tyrosine phosphataseDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan
PF09668Asp_proteaseAspartyl proteaseFamilyInterproscan
PF03732Retrotrans_gagRetrotransposon gag protein FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR045609DomainDomain of unknown function DUF6451Interproscan
IPR042224FamilyGeneral transcription factor II-I repeat domain-containing protein 2Interproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR000242DomainTyrosine-specific protein phosphatase, PTPase domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR023780DomainChromo domainInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR019103DomainAspartic peptidase, DDI1-typeInterproscan
IPR005162DomainRetrotransposon gag domainInterproscan
IPR036409Homologous_superfamilyClass II aldolase/adducin N-terminal domain superfamilyInterproscan
IPR051017FamilyAldolase class II Adducin subfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23159CENTROSOMAL PROTEIN 2Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47831GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 2Interproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33223CCHC-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10672ADDUCINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004725Molecular Functionprotein tyrosine phosphatase activityInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0014069Cellular Componentpostsynaptic densityInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

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