Gene detail

Detailed information of Aala_g733.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4039148.1, Hypothetical predicted protein [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P04323	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q7TD08	Enzymatic polyprotein OS=Cestrum yellow leaf curling virus OX=175814 GN=ORF V PE=3 SV=1
P23074	Pro-Pol polyprotein OS=Simian foamy virus type 1 OX=338478 GN=pol PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02234	CDI	Cyclin-dependent kinase inhibitor	Family	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044898	Homologous_superfamily	Cyclin-dependent kinase inhibitor domain superfamily	Interproscan
IPR003175	Domain	Cyclin-dependent kinase inhibitor domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR052560	Family	RNA-directed DNA polymerase, mobile element	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10265	CYCLIN-DEPENDENT KINASE INHIBITOR 1	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR33198	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR36688	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004861	Molecular Function	cyclin-dependent protein serine/threonine kinase inhibitor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0051726	Biological Process	regulation of cell cycle	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11299	HMGN1; high-mobility group nucleosome-binding domain-containing protein 1	-	Chromosome and associated proteins	ko03036	deepkoala