Detailed information of Aala_g740.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAI9719303.1, Hypothetical predicted protein [Octopus vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6DFM1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Xenopus tropicalis OX=8364 GN=smarcb1 PE=2 SV=1
Q6GQ82SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Xenopus laevis OX=8355 GN=smarcb1 PE=2 SV=1
Q5BIN2SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Bos taurus OX=9913 GN=SMARCB1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05585DUF1758Putative peptidase (DUF1758)FamilyInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF01541GIY-YIGGIY-YIG catalytic domainDomainInterproscan
PF21459INI1_DNA-bdSWI/SNF Subunit INI1, DNA binding domainDomainInterproscan
PF16211Histone_H2A_CC-terminus of histone H2AFamilyInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF01408GFO_IDH_MocAOxidoreductase family, NAD-binding Rossmann foldFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR008737DomainPeptidase aspartic, putativeInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR048664DomainSWI/SNF Subunit INI1, DNA binding domainInterproscan
IPR032454DomainHistone H2A, C-terminal domainInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR002119FamilyHistone H2AInterproscan
IPR032458Conserved_siteHistone H2A conserved siteInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR000683DomainGfo/Idh/MocA-like oxidoreductase, N-terminalInterproscan
IPR050463FamilyGfo/Idh/MocA family oxidoreductases and glycosidasesInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR006580DomainZinc finger, TTF-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22955RETROTRANSPOSONInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23430HISTONE H2AInterproscan
PTHR43818BCDNA.GH03377Interproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0006342Biological Processheterochromatin formationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11251H2A; histone H2A-DNA repair and recombination proteinsko03400deepkoala
Exosomeko04147deepkoala

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