Detailed information of Aala_g742.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI0207297.1, hypothetical protein LSAT2_008050 [Lamellibrachia satsuma]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q4R3B7Schlafen-like protein 1 OS=Macaca fascicularis OX=9541 GN=SLFNL1 PE=2 SV=1
Q499Z3Schlafen-like protein 1 OS=Homo sapiens OX=9606 GN=SLFNL1 PE=1 SV=2
Q8BHW9Schlafen-like protein 1 OS=Mus musculus OX=10090 GN=Slfnl1 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15511CENP-T_CCentromere kinetochore component CENP-T histone foldDomainInterproscan
PF03371PRP38PRP38 familyFamilyInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF04326SLFN_AlbA_2Schlafen, AlbA_2DomainInterproscan
PF05485THAPTHAP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001951FamilyHistone H4Interproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR004823DomainTATA box binding protein associated factor (TAF), histone-like fold domainInterproscan
IPR035425DomainCENP-T/Histone H4, histone foldInterproscan
IPR019809Conserved_siteHistone H4, conserved siteInterproscan
IPR005037FamilyPre-mRNA-splicing factor 38Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR007421DomainSchlafen, AlbA_2 domainInterproscan
IPR029684FamilySchlafen familyInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR038441Homologous_superfamilyTHAP-type zinc finger superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10484HISTONE H4Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33776ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47958ATP-DEPENDENT RNA HELICASE DBP3Interproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR12155SCHLAFENInterproscan
PTHR40380FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11254H4; histone H4-Chromosome and associated proteinsko03036deepkoala

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