Detailed information of Aala_g746.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_056423800.1, tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X3 [Hyla sarda]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q2T9V5tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Bos taurus OX=9913 GN=TRMT6 PE=2 SV=1
Q9UJA5tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Homo sapiens OX=9606 GN=TRMT6 PE=1 SV=1
Q8CE96tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Mus musculus OX=10090 GN=Trmt6 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01434Peptidase_M41Peptidase family M41DomainInterproscan
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017423FamilytRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6Interproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR050649FamilyPaired Homeobox Transcription FactorsInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR052076FamilyTransient receptor potential cation channelInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR037219Homologous_superfamilyPeptidase M41-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000642DomainPeptidase M41Interproscan
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan
IPR050928FamilyATP-dependent Zinc MetalloproteaseInterproscan
IPR001734FamilySodium/solute symporterInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12945TRANSLATION INITIATION FACTOR EIF3-RELATEDInterproscan
PTHR24329HOMEOBOX PROTEIN ARISTALESSInterproscan
PTHR47143TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESSInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR43655ATP-DEPENDENT PROTEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan
GO:0031515Cellular ComponenttRNA (m1A) methyltransferase complexInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004176Molecular FunctionATP-dependent peptidase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005745Cellular Componentm-AAA complexInterproscan
GO:0034982Biological Processmitochondrial protein processingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

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