Detailed information of Aala_g75.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_015753140.1, PREDICTED: far upstream element-binding protein 2-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q32PX7Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1
Q96AE4Far upstream element-binding protein 1 OS=Homo sapiens OX=9606 GN=FUBP1 PE=1 SV=3
Q91WJ8Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF00565SNaseStaphylococcal nuclease homologueDomainInterproscan
PF00013KH_1KH domainDomainInterproscan
PF00135COesteraseCarboxylesterase familyDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR035437Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR016071DomainStaphylococcal nuclease (SNase-like), OB-foldInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR015946Homologous_superfamilyK homology domain-like, alpha/betaInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR002018DomainCarboxylesterase, type BInterproscan
IPR019819Conserved_siteCarboxylesterase type B, conserved siteInterproscan
IPR050309FamilyType-B Carboxylesterase/LipaseInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR037493FamilyExodeoxyribonuclease III-likeInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12302EBNA2 BINDING PROTEIN P100Interproscan
PTHR11559CARBOXYLESTERASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR43250EXODEOXYRIBONUCLEASE IIIInterproscan
PTHR47160PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008311Molecular Functiondouble-stranded DNA 3'-5' DNA exonuclease activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

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