Detailed information of Aala_g764.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCT5353384.1, endonuclease/exonuclease/phosphatase family protein [Pseudomonas aeruginosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O02751Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
Q588U8Craniofacial development protein 2 OS=Tragulus javanicus OX=9849 GN=CFDP2 PE=2 SV=1
O02751Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF13873Myb_DNA-bind_5Myb/SANT-like DNA-binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF08941USP8_interactUSP8 interactingDomainInterproscan
PF04547AnoctaminCalcium-activated chloride channelFamilyInterproscan
PF00628PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR028002DomainMyb/SANT-like DNA-binding domain 5Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR003613DomainU-box domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR037255Homologous_superfamilyNRDP1, C-terminalInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR015036DomainE3 ubiquitin-protein ligase NRDP1Interproscan
IPR049452DomainAnoctamin, transmembrane domainInterproscan
IPR007632FamilyAnoctaminInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12308ANOCTAMINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005254Molecular Functionchloride channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:1902476Biological Processchloride transmembrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11299HMGN1; high-mobility group nucleosome-binding domain-containing protein 1-Mitochondrial biogenesisko03029deepkoala
Chromosome and associated proteinsko03036deepkoala

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