Detailed information of Aala_g770.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_020915909.1, geminin [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O88513Geminin OS=Mus musculus OX=10090 GN=Gmnn PE=1 SV=1
Q66H30Gypsy retrotransposon integrase-like protein 1 OS=Rattus norvegicus OX=10116 GN=GIN1 PE=2 SV=1
Q8K259Gypsy retrotransposon integrase-like protein 1 OS=Mus musculus OX=10090 GN=Gin1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF15346ARGLUArginine and glutamate-rich 1Coiled-coilInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF07412GemininGemininFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000515DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan
IPR014010DomainREJ domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR033371FamilyArginine and glutamate-rich protein 1Interproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR022786FamilyGeminin/MulticilinInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR31711ARGININE AND GLUTAMATE-RICH PROTEIN 1Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR34072ENZYMATIC POLYPROTEIN-RELATEDInterproscan
PTHR13372GEMININInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008156Biological Processnegative regulation of DNA replicationInterproscan
GO:0045786Biological Processnegative regulation of cell cycleInterproscan
GO:0006275Biological Processregulation of DNA replicationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10749GMNN; geminin-DNA replication proteinsko03032deepkoala

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