Detailed information of Aala_g774.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG2466217.1, ZBED8 protein, partial [Polypterus senegalus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IZ13Protein FAM200C OS=Homo sapiens OX=9606 GN=FAM200C PE=1 SV=1
A4Z945Protein FAM200C OS=Bos taurus OX=9913 GN=FAM200C PE=2 SV=1
D5LMJ3Zinc metalloproteinase-disintegrin-like atrase-A OS=Naja atra OX=8656 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01421ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR044281FamilyU3 snoRNP protein/Ribosome production factor 1Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR001590DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR034027DomainReprolysin domain, adamalysin-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10773DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2Interproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR22734U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4Interproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR11905ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0000460Biological Processmaturation of 5.8S rRNAInterproscan
GO:0000470Biological Processmaturation of LSU-rRNAInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0030687Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0042134Molecular FunctionrRNA primary transcript bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan

TOP