Detailed information of Aala_g779.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_045119490.1, uncharacterized protein LOC123509327 [Portunus trituberculatus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3U3E2Protein FAM117B OS=Mus musculus OX=10090 GN=Fam117b PE=1 SV=1
Q6P1L5Protein FAM117B OS=Homo sapiens OX=9606 GN=FAM117B PE=1 SV=2
Q8K3I9Glucocorticoid-induced transcript 1 protein OS=Mus musculus OX=10090 GN=Glcci1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04438zf-HITHIT zinc fingerDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF15388FAM117Protein Family FAM117DisorderedInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007529DomainZinc finger, HIT-typeInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR026642FamilyGlucocorticoid-induced transcript 1/FAM117Interproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR005821DomainIon transport domainInterproscan
IPR043203FamilyVoltage-gated cation channel calcium and sodiumInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48365CCHC-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR14972AGAP011572-PAInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0001518Cellular Componentvoltage-gated sodium channel complexInterproscan
GO:0005248Molecular Functionvoltage-gated sodium channel activityInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0008332Molecular Functionlow voltage-gated calcium channel activityInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0070509Biological Processcalcium ion importInterproscan
GO:0086010Biological Processmembrane depolarization during action potentialInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02970RP-S21, MRPS21, rpsU; small subunit ribosomal protein S21-Ribosomeko03011deepkoala

TOP