Detailed information of Aala_g782.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI8481230.1, hypothetical protein Bbelb_410330 [Branchiostoma belcheri]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21328RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1
Q95SX7Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
P21329RNA-directed DNA polymerase from mobile element jockey OS=Drosophila funebris OX=7221 GN=jockeypol PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05585DUF1758Putative peptidase (DUF1758)FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF02023SCANSCAN domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008737DomainPeptidase aspartic, putativeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR052229FamilyCollagen VI and Biomineralization Protein PIFInterproscan
IPR002038FamilyOsteopontinInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR051547FamilyTyrosyl-DNA phosphodiesterase 2-likeInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR003309DomainSCAN domainInterproscan
IPR038269Homologous_superfamilySCAN domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR22588UNCHARACTERIZEDInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR15822TRAF AND TNF RECEPTOR-ASSOCIATED PROTEINInterproscan
PTHR47481-Interproscan
PTHR46888ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0001503Biological ProcessossificationInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0016605Cellular ComponentPML bodyInterproscan
GO:0070260Molecular Function5'-tyrosyl-DNA phosphodiesterase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05857PLCD; phosphatidylinositol phospholipase C, deltaEC:3.1.4.11
Ribosome biogenesisko03009deepkoala
Viral proteinsko03200deepkoala
Membrane traffickingko04131deepkoala

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