Detailed information of Aala_g788.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_004210823.1, muscarinic acetylcholine receptor M3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P193275-hydroxytryptamine receptor 1A OS=Rattus norvegicus OX=10116 GN=Htr1a PE=1 SV=1
Q9N2975-hydroxytryptamine receptor 1A OS=Gorilla gorilla gorilla OX=9595 GN=HTR1A PE=3 SV=1
P089085-hydroxytryptamine receptor 1A OS=Homo sapiens OX=9606 GN=HTR1A PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13087AAA_12AAA domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF000037tm_37 transmembrane sweet-taste receptor of 3 GCPRDomainInterproscan
PF01612DNA_pol_A_exo13'-5' exonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR045055FamilyDNA2/NAM7-like helicaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR033270FamilyVPRBP/DCAF1 familyInterproscan
IPR005819FamilyLinker histone H1/H5Interproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR050628FamilySNF2/RAD54 Helicase and Transcription FactorInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR017978DomainGPCR family 3, C-terminalInterproscan
IPR050726FamilyMetabotropic Glutamate ReceptorInterproscan
IPR000337FamilyGPCR, family 3Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR002562Domain3'-5' exonuclease domainInterproscan
IPR045092FamilyExosome complex exonuclease Rrp6-likeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR10887DNA2/NAM7 HELICASE FAMILYInterproscan
PTHR31511PROTEIN CBG23764Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR13129VPRBP PROTEIN-RELATEDInterproscan
PTHR242475-HYDROXYTRYPTAMINE RECEPTORInterproscan
PTHR45626TRANSCRIPTION TERMINATION FACTOR 2-RELATEDInterproscan
PTHR24060METABOTROPIC GLUTAMATE RECEPTORInterproscan
PTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0080008Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004993Molecular FunctionG protein-coupled serotonin receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007187Biological ProcessG protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messengerInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030425Cellular ComponentdendriteInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008094Molecular FunctionATP-dependent activity, acting on DNAInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0001640Molecular Functionadenylate cyclase inhibiting G protein-coupled glutamate receptor activityInterproscan
GO:0007216Biological ProcessG protein-coupled glutamate receptor signaling pathwayInterproscan
GO:0051966Biological Processregulation of synaptic transmission, glutamatergicInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0008408Molecular Function3'-5' exonuclease activityInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000176Cellular Componentnuclear exosome (RNase complex)Interproscan
GO:0000467Biological Processexonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0071035Biological Processnuclear polyadenylation-dependent rRNA catabolic processInterproscan
GO:0071036Biological Processnuclear polyadenylation-dependent snoRNA catabolic processInterproscan
GO:0071037Biological Processnuclear polyadenylation-dependent snRNA catabolic processInterproscan
GO:0071038Biological ProcessTRAMP-dependent tRNA surveillance pathwayInterproscan
GO:0071039Biological Processnuclear polyadenylation-dependent CUT catabolic processInterproscan
GO:0071040Biological Processnuclear polyadenylation-dependent antisense transcript catabolic processInterproscan
GO:0071044Biological Processhistone mRNA catabolic processInterproscan
GO:0071051Biological Processpoly(A)-dependent snoRNA 3'-end processingInterproscan

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