Detailed information of Aala_g791.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_038656942.1, zinc finger BED domain-containing protein 5-like [Scyliorhinus canicula]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6R2W3SCAN domain-containing protein 3 OS=Homo sapiens OX=9606 GN=SCAND3 PE=1 SV=1
Q39575Dynein gamma chain, flagellar outer arm OS=Chlamydomonas reinhardtii OX=3055 GN=ODA2 PE=1 SV=1
Q9GV72Toxin CrTX-A OS=Carybdea rastonii OX=78582 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR040410FamilyUPF0658 Golgi apparatus membrane proteinInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR051666FamilySeminal Plasma Capacitation RegulatorInterproscan
IPR007698DomainAlanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR051168FamilyAlpha-aminoadipic semialdehyde synthaseInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR34391UPF0658 GOLGI APPARATUS MEMBRANE PROTEIN C1952.10C-RELATEDInterproscan
PTHR46961DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEINInterproscan
PTHR22918SEMINAL PLASMA PROTEINInterproscan
PTHR11133SACCHAROPINE DEHYDROGENASEInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0008201Molecular Functionheparin bindingInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0004753Molecular Functionsaccharopine dehydrogenase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0019878Biological Processlysine biosynthetic process via aminoadipic acidInterproscan

TOP