Detailed information of Aala_g796.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_020604353.1, fibropellin-1-like, partial [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99NF1Carotenoid-cleaving dioxygenase, mitochondrial OS=Mus musculus OX=10090 GN=Bco2 PE=1 SV=1
Q6QT07Carotenoid-cleaving dioxygenase, mitochondrial OS=Mustela putorius furo OX=9669 GN=BCO2 PE=1 SV=1
Q9JJS6Beta,beta-carotene 15,15'-dioxygenase OS=Mus musculus OX=10090 GN=Bco1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03055RPE65Retinal pigment epithelial membrane proteinRepeatInterproscan
PF03732Retrotrans_gagRetrotransposon gag protein FamilyInterproscan
PF09746MembralinTumour-associated proteinFamilyInterproscan
PF10257RAI16-likeRetinoic acid induced 16-like proteinRepeatInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR004294FamilyCarotenoid oxygenaseInterproscan
IPR005162DomainRetrotransposon gag domainInterproscan
IPR019144FamilyMembralinInterproscan
IPR019384FamilyFHF complex subunit HOOK interacting proteinInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR051242FamilyWD repeat and EF-hand domain-containing proteinInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR050906FamilyNotch signaling pathwayInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR26312TETRATRICOPEPTIDE REPEAT PROTEIN 5Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10543BETA-CAROTENE DIOXYGENASEInterproscan
PTHR33223CCHC-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21650MEMBRALIN/KINETOCHORE PROTEIN NUF2Interproscan
PTHR21705RAI16 PROTEIN-RELATEDInterproscan
PTHR44324WD40 REPEAT DOMAIN 95Interproscan
PTHR24044NOTCH LIGAND FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan
GO:0003834Molecular Functionbeta-carotene 15,15'-dioxygenase activityInterproscan
GO:0004744Molecular Functionobsolete retinal isomerase activityInterproscan
GO:0010436Molecular Functioncarotenoid dioxygenase activityInterproscan
GO:0016121Biological Processcarotene catabolic processInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0034976Biological Processresponse to endoplasmic reticulum stressInterproscan
GO:1904294Biological Processpositive regulation of ERAD pathwayInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005112Molecular FunctionNotch bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24466NOTCH2NL; Notch homolog 2 N-terminal-like protein-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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