Detailed information of Aala_g804.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB3994985.1, Retrovirus-related Pol poly from transposon [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9BZJ0Crooked neck-like protein 1 OS=Homo sapiens OX=9606 GN=CRNKL1 PE=1 SV=4
P63154Crooked neck-like protein 1 OS=Mus musculus OX=10090 GN=Crnkl1 PE=1 SV=1
P63155Crooked neck-like protein 1 OS=Rattus norvegicus OX=10116 GN=Crnkl1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF05585DUF1758Putative peptidase (DUF1758)FamilyInterproscan
PF00688TGFb_propeptideTGF-beta propeptideFamilyInterproscan
PF00019TGF_betaTransforming growth factor beta like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR008737DomainPeptidase aspartic, putativeInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001111DomainTGF-beta, propeptideInterproscan
IPR029034Homologous_superfamilyCystine-knot cytokineInterproscan
IPR001839DomainTransforming growth factor-beta, C-terminalInterproscan
IPR015615FamilyTransforming growth factor-beta-relatedInterproscan
IPR017948Conserved_siteTransforming growth factor beta, conserved siteInterproscan
IPR003107RepeatHAT (Half-A-TPR) repeatInterproscan
IPR045075FamilyPre-mRNA-splicing factor Syf1-likeInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan
PTHR24190ION_TRANS DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11848TGF-BETA FAMILYInterproscan
PTHR11246PRE-MRNA SPLICING FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008083Molecular Functiongrowth factor activityInterproscan
GO:0005125Molecular Functioncytokine activityInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0000245Biological Processspliceosomal complex assemblyInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000974Cellular ComponentPrp19 complexInterproscan
GO:0071007Cellular ComponentU2-type catalytic step 2 spliceosomeInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0071014Cellular Componentpost-mRNA release spliceosomal complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14169CTU2, NCS2; cytoplasmic tRNA 2-thiolation protein 2-Transfer RNA biogenesisko03016deepkoala

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