Detailed information of Aala_g81.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_045174424.2, craniofacial development protein 2-like [Mercenaria mercenaria]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9DF50Claspin OS=Xenopus laevis OX=8355 GN=clspn PE=1 SV=2
Q80YR7Claspin OS=Mus musculus OX=10090 GN=Clspn PE=1 SV=2
Q9HAW4Claspin OS=Homo sapiens OX=9606 GN=CLSPN PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00755Carn_acyltransfCholine/Carnitine o-acyltransferaseFamilyInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF01490Aa_transTransmembrane amino acid transporter proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR051714FamilyCCHC-type Zinc Finger Nucleic Acid BindingInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR023213Homologous_superfamilyChloramphenicol acetyltransferase-like domain superfamilyInterproscan
IPR039551DomainCholine/carnitine acyltransferase domainInterproscan
IPR000542FamilyAcyltransferase ChoActase/COT/CPTInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR024146FamilyClaspinInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR013057DomainAmino acid transporter, transmembrane domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR23002ZINC FINGER CCHC DOMAIN CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR22589CARNITINE O-ACYLTRANSFERASEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR14396CLASPINInterproscan
PTHR22950AMINO ACID TRANSPORTERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0045182Molecular Functiontranslation regulator activityInterproscan
GO:2000767Biological Processpositive regulation of cytoplasmic translationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0007095Biological Processmitotic G2 DNA damage checkpoint signalingInterproscan
GO:0010997Molecular Functionanaphase-promoting complex bindingInterproscan
GO:0032147Biological Processactivation of protein kinase activityInterproscan
GO:0033314Biological Processmitotic DNA replication checkpoint signalingInterproscan
GO:0003333Biological Processamino acid transmembrane transportInterproscan
GO:0005774Cellular Componentvacuolar membraneInterproscan
GO:0015179Molecular FunctionL-amino acid transmembrane transporter activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01056PTH1, PTRH1, pth, spoVC; peptidyl-tRNA hydrolase, PTH1 familyEC:3.1.1.29
Translation factorsko03012deepkoala

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