Detailed information of Aala_g817.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_046863305.1, protein ELYS-like [Xenia sp. Carnegie-2017]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8WYP5Protein ELYS OS=Homo sapiens OX=9606 GN=AHCTF1 PE=1 SV=3
Q8CJF7Protein ELYS OS=Mus musculus OX=10090 GN=Ahctf1 PE=1 SV=1
Q5R9H4APOBEC1 complementation factor OS=Pongo abelii OX=9601 GN=A1CF PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF21528CC2D1A-B_DM14Coiled-coil and C2 domain-containing protein 1, DM14 domainCoiled-coilInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF16687ELYS-bbbeta-propeller of ELYS nucleoporinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR006608DomainCoiled-coil and C2 domain-containing protein 1, DM14 domainInterproscan
IPR039725FamilyCoiled-coil and C2 domain-containing protein 1Interproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052620FamilyELYS/MEL-28 Nuclear Assembly FactorInterproscan
IPR032040DomainELYS, beta-propeller domainInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR45749-Interproscan
PTHR13076UNCHARACTERIZEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21583ELYS PROTEINInterproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001227Molecular FunctionDNA-binding transcription repressor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02916RP-L35, MRPL35, rpmI; large subunit ribosomal protein L35-Translation factorsko03012deepkoala
Exosomeko04147deepkoala
Ribosomeko03011deepkoala

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