Detailed information of Aala_g825.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4001891.1, E3 SUMO- ligase KIAA1586-like isoform X4 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21328RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1
Q95SX7Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
Q9NBX4Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF00075RNase_HRNase HDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR002156DomainRibonuclease H domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR052638FamilyPiggyBac transposable element-derivedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR34615PX DOMAIN-CONTAINING PROTEINInterproscan
PTHR47055DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

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