Detailed information of Aala_g835.t1 in Alatina alata

Genomic Location: :...
NR annotation: GFS09068.1, endonuclease-reverse transcriptase [Elysia marginata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q93062RNA-binding protein with multiple splicing OS=Homo sapiens OX=9606 GN=RBPMS PE=1 SV=1
Q9WVB0RNA-binding protein with multiple splicing OS=Mus musculus OX=10090 GN=Rbpms PE=1 SV=2
A0A8I6G705RNA-binding protein with multiple splicing OS=Rattus norvegicus OX=10116 GN=Rbpms PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyCSD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF09004ALKBH8_NAlkylated DNA repair protein alkB homolog 8, N-terminalDomainInterproscan
PF00313CSD'Cold-shock' DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR015095DomainAlkylated DNA repair protein AlkB, homologue 8, N-terminalInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR050181FamilyCold shock domain-containing proteinInterproscan
IPR002059DomainCold-shock protein, DNA-bindingInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR019844DomainCold-shock (CSD) domainInterproscan
IPR011129DomainCold shock domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10501U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN BInterproscan
PTHR11544COLD SHOCK DOMAIN CONTAINING PROTEINSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0016706Molecular Function2-oxoglutarate-dependent dioxygenase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan

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