Detailed information of Aala_g836.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4001367.1, Hypothetical predicted protein [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
E6ZIJ1RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Dicentrarchus labrax OX=13489 GN=rbck1 PE=3 SV=1
A9JTG5RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Danio rerio OX=7955 GN=rbck1 PE=2 SV=1
Q9WUB0RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Mus musculus OX=10090 GN=Rbck1 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|RBR

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan
PF03732Retrotrans_gagRetrotransposon gag protein FamilyInterproscan
PF13757VIT_2Vault protein inter-alpha-trypsin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR028765FamilyIQ calmodulin-binding motif-containing protein 1Interproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR005162DomainRetrotransposon gag domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR047558DomainHeme-oxidized IRP2 ubiquitin ligase 1, BRcat domainInterproscan
IPR051628FamilyLinear Ubiquitination-Associated E3 LigasesInterproscan
IPR013694DomainVIT domainInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR15673IQ CALMODULIN-BINDING MOTIF CONTAINING PROTEIN 1Interproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47679PROTEIN TORNADO 1Interproscan
PTHR33223CCHC-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR22770UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATEDInterproscan
PTHR45737VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005516Molecular Functioncalmodulin bindingInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0097039Biological Processprotein linear polyubiquitinationInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14388SLC5A8_12, SMCT; solute carrier family 5 (sodium-coupled monocarboxylate transporter), member 8/12-Enzymes with EC numbers-deepkoala
Transportersko02000deepkoala

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