Gene detail

Detailed information of Aala_g84.t1 in Alatina alata

Genomic Location: :...
NR annotation: EFX71516.1, hypothetical protein DAPPUDRAFT_111718 [Daphnia pulex]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q65Z59	Protein yippee-like 1 OS=Chlorocebus aethiops OX=9534 GN=YPEL1 PE=3 SV=1
Q9DG42	Protein yippee-like 1 OS=Coturnix japonica OX=93934 GN=YPEL1 PE=3 SV=1
O60688	Protein yippee-like 1 OS=Homo sapiens OX=9606 GN=YPEL1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13540	RCC1_2	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan
PF03226	Yippee-Mis18	Yippee zinc-binding/DNA-binding /Mis18, centromere assembly	Domain	Interproscan
PF01498	HTH_Tnp_Tc3_2	Transposase	Family	Interproscan
PF03564	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan
PF00514	Arm	Armadillo/beta-catenin-like repeat	Repeat	Interproscan
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039662	Family	Cohesin subunit Scc3/SA	Interproscan
IPR051625	Family	Diverse Signaling and Regulatory Domain-Containing Protein	Interproscan
IPR000408	Repeat	Regulator of chromosome condensation, RCC1	Interproscan
IPR009091	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR034751	Domain	Yippee domain	Interproscan
IPR039058	Family	Yippee family	Interproscan
IPR004910	Domain	Yippee/Mis18/Cereblon	Interproscan
IPR002492	Domain	Transposase, Tc1-like	Interproscan
IPR005312	Family	Protein of unknown function DUF1759	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR013284	Family	Beta-catenin	Interproscan
IPR000225	Repeat	Armadillo	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR052717	Family	Vacuolar processing and transposase activity regulators	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11199	STROMAL ANTIGEN	Interproscan
PTHR22872	BTK-BINDING PROTEIN-RELATED	Interproscan
PTHR13848	PROTEIN YIPPEE-LIKE CG15309-RELATED	Interproscan
PTHR47331	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR45976	ARMADILLO SEGMENT POLARITY PROTEIN	Interproscan
PTHR46169	DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000785	Cellular Component	chromatin	Interproscan
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0007062	Biological Process	sister chromatid cohesion	Interproscan
GO:0008278	Cellular Component	cohesin complex	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006313	Biological Process	DNA transposition	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003713	Molecular Function	transcription coactivator activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005912	Cellular Component	adherens junction	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0016342	Cellular Component	catenin complex	Interproscan
GO:0019903	Molecular Function	protein phosphatase binding	Interproscan
GO:0035257	Molecular Function	nuclear receptor binding	Interproscan
GO:0045294	Molecular Function	alpha-catenin binding	Interproscan
GO:0045296	Molecular Function	cadherin binding	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0060070	Biological Process	canonical Wnt signaling pathway	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan
GO:0140297	Molecular Function	DNA-binding transcription factor binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K21812	E5; Alphapapillomavirus protein E5	-	Viral proteins	ko03200	deepkoala