Detailed information of Aala_g847.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAA0190171.1, hypothetical protein HAZT_HAZT009052 [Hyalella azteca]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3MHR7Actin-related protein 2/3 complex subunit 2 OS=Bos taurus OX=9913 GN=ARPC2 PE=1 SV=1
O15144Actin-related protein 2/3 complex subunit 2 OS=Homo sapiens OX=9606 GN=ARPC2 PE=1 SV=1
Q9CVB6Actin-related protein 2/3 complex subunit 2 OS=Mus musculus OX=10090 GN=Arpc2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04045P34-ArcArp2/3 complex, 34 kD subunit p34-ArcFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF03853YjeF_NYjeF-related protein N-terminusDomainInterproscan
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan
PF01436NHLNHL repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR034666Homologous_superfamilyArp2/3 complex subunit 2/4Interproscan
IPR007188FamilyActin-related protein 2/3 complex subunit 2Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR004443DomainYjeF N-terminal domainInterproscan
IPR032976FamilyYjeF N-terminal domain-containing protein NAXE-likeInterproscan
IPR036652Homologous_superfamilyYjeF N-terminal domain superfamilyInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan
PTHR12058ARP2/3 COMPLEX 34 KDA SUBUNITInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR13232NAD(P)H-HYDRATE EPIMERASEInterproscan
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR10680PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASEInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005885Cellular ComponentArp2/3 protein complexInterproscan
GO:0015629Cellular Componentactin cytoskeletonInterproscan
GO:0030041Biological Processactin filament polymerizationInterproscan
GO:0034314Biological ProcessArp2/3 complex-mediated actin nucleationInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0052856Molecular FunctionNAD(P)HX epimerase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan

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