Genomic Location: :...
NR annotation: CAB3993108.1, Hypothetical predicted protein [Paramuricea clavata]
| CDS |
| Transcript |
| Protein |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF09004 | ALKBH8_N | Alkylated DNA repair protein alkB homolog 8, N-terminal | Domain | Interproscan |
| PF03564 | DUF1759 | Protein of unknown function (DUF1759) | Family | Interproscan |
| PF00665 | rve | Integrase core domain | Domain | Interproscan |
| PF13843 | DDE_Tnp_1_7 | Transposase IS4 | Domain | Interproscan |
| PF00167 | FGF | Fibroblast growth factor | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR052160 | Family | Gypsy Retrotransposon Integrase-like | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR014010 | Domain | REJ domain | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR015095 | Domain | Alkylated DNA repair protein AlkB, homologue 8, N-terminal | Interproscan |
| IPR005312 | Family | Protein of unknown function DUF1759 | Interproscan |
| IPR035901 | Homologous_superfamily | GIY-YIG endonuclease superfamily | Interproscan |
| IPR005819 | Family | Linker histone H1/H5 | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR001965 | Domain | Zinc finger, PHD-type | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR029526 | Domain | PiggyBac transposable element-derived protein | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR002209 | Family | Fibroblast growth factor family | Interproscan |
| IPR008996 | Homologous_superfamily | Cytokine IL1/FGF | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47266 | ENDONUCLEASE-RELATED | Interproscan |
| PTHR19446 | REVERSE TRANSCRIPTASES | Interproscan |
| PTHR47331 | PHD-TYPE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR21301 | REVERSE TRANSCRIPTASE | Interproscan |
| PTHR46238 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR46599 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 | Interproscan |
| PTHR11486 | FIBROBLAST GROWTH FACTOR | Interproscan |
| PTHR47018 | CXC DOMAIN-CONTAINING PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0008168 | Molecular Function | methyltransferase activity | Interproscan |
| GO:0016706 | Molecular Function | 2-oxoglutarate-dependent dioxygenase activity | Interproscan |
| GO:0000786 | Cellular Component | nucleosome | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006334 | Biological Process | nucleosome assembly | Interproscan |
| GO:0030527 | Molecular Function | structural constituent of chromatin | Interproscan |
| GO:0008083 | Molecular Function | growth factor activity | Interproscan |
