Genomic Location: :...
NR annotation: HCX22453.1, hypothetical protein [Cytophagales bacterium]
| CDS | |||||
| Transcript |
| Protein |
| Uniprot term | Description |
|---|---|
| Q9NBX4 | Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1 |
| Q95SX7 | Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1 |
| P21328 | RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF21381 | MCLN_ECD | Mucolipin, extracytosolic domain | Domain | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF05181 | XPA_C | XPA protein C-terminus | Domain | Interproscan |
| PF01286 | XPA_N | XPA protein N-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR049134 | Domain | Mucolipin, extracytosolic domain | Interproscan |
| IPR050439 | Family | ADAMTS and ADAMTS-like | Interproscan |
| IPR024079 | Homologous_superfamily | Metallopeptidase, catalytic domain superfamily | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR009061 | Homologous_superfamily | Putative DNA-binding domain superfamily | Interproscan |
| IPR000465 | Family | XPA/RAD14 | Interproscan |
| IPR022652 | Conserved_site | Zinc finger, XPA-type, conserved site | Interproscan |
| IPR037129 | Homologous_superfamily | XPA domain superfamily | Interproscan |
| IPR022656 | Domain | XPA, C-terminal | Interproscan |
| IPR040247 | Family | Protein of unknown function DUF5524 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13723 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE | Interproscan |
| PTHR19446 | REVERSE TRANSCRIPTASES | Interproscan |
| PTHR47027 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR10142 | DNA REPAIR PROTEIN COMPLEMENTING XP-A CELLS | Interproscan |
| PTHR31097 | SI:DKEY-276J7.1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004222 | Molecular Function | metalloendopeptidase activity | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
| GO:0030198 | Biological Process | extracellular matrix organization | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
| GO:0008237 | Molecular Function | metallopeptidase activity | Interproscan |
| GO:0003684 | Molecular Function | damaged DNA binding | Interproscan |
| GO:0006289 | Biological Process | nucleotide-excision repair | Interproscan |
| GO:0000110 | Cellular Component | nucleotide-excision repair factor 1 complex | Interproscan |
| GO:0000715 | Biological Process | nucleotide-excision repair, DNA damage recognition | Interproscan |
| GO:0006284 | Biological Process | base-excision repair | Interproscan |
| GO:0033683 | Biological Process | obsolete nucleotide-excision repair, DNA incision | Interproscan |
| GO:0070914 | Biological Process | UV-damage excision repair | Interproscan |
| GO:1901255 | Biological Process | nucleotide-excision repair involved in interstrand cross-link repair | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10847 | XPA; DNA-repair protein complementing XP-A cells | - | Chromosome and associated proteins | ko03036 | deepkoala |
| DNA repair and recombination proteins | ko03400 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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