Detailed information of Aala_g875.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAJ7394208.1, Patched domain-containing protein 3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
M0R3Q7Patched domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ptchd3 PE=1 SV=1
Q0EEE2Patched domain-containing protein 3 OS=Mus musculus OX=10090 GN=Ptchd3 PE=1 SV=1
Q3KNS1Patched domain-containing protein 3 OS=Homo sapiens OX=9606 GN=PTCHD3 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02460PatchedPatched familyFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR009231FamilyChloride channel CLIC-likeInterproscan
IPR003392FamilyProtein patched/dispatchedInterproscan
IPR000731DomainSterol-sensing domainInterproscan
IPR051697FamilyPatched domain-containing proteinInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR037094Homologous_superfamilyGlycoside hydrolase family 38, central domain superfamilyInterproscan
IPR011330Homologous_superfamilyGlycoside hydrolase/deacetylase, beta/alpha-barrelInterproscan
IPR011013Homologous_superfamilyGalactose mutarotase-like domain superfamilyInterproscan
IPR050843FamilyGlycosyl Hydrolase Family 38Interproscan
IPR028995Homologous_superfamilyGlycoside hydrolase families 57/38, central domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR34093CHLORIDE CHANNEL CLIC-LIKE PROTEIN 1Interproscan
PTHR10796PATCHED-RELATEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR11607ALPHA-MANNOSIDASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0005254Molecular Functionchloride channel activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004559Molecular Functionalpha-mannosidase activityInterproscan
GO:0006013Biological Processmannose metabolic processInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24682PTCHD; patched domain-containing protein-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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