Detailed information of Aala_g883.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAJ8349363.1, hypothetical protein SKAU_G00244930 [Synaphobranchus kaupii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P21328RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1
P21329RNA-directed DNA polymerase from mobile element jockey OS=Drosophila funebris OX=7221 GN=jockeypol PE=1 SV=1
B0BNF92-Hydroxyacid oxidase 1 OS=Rattus norvegicus OX=10116 GN=Hao1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyDUB|ULP|ULP
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01070FMN_dhFMN-dependent dehydrogenaseDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF04710Pellino_FHAPellino, FHA domainDomainInterproscan
PF01564Spermine_synthSpermine/spermidine synthase domainDomainInterproscan
PF17284Spermine_synt_NSpermidine synthase tetramerisation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008259Active_siteFMN-dependent alpha-hydroxy acid dehydrogenase, active siteInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR037396DomainFMN hydroxy acid dehydrogenase domainInterproscan
IPR012133FamilyAlpha-hydroxy acid dehydrogenase, FMN-dependentInterproscan
IPR000262DomainFMN-dependent dehydrogenaseInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR003653DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR048334DomainPellino, FHA domainInterproscan
IPR030373Conserved_sitePolyamine biosynthesis domain, conserved siteInterproscan
IPR037163Homologous_superfamilySpermidine synthase, tetramerisation domain superfamilyInterproscan
IPR001045FamilySpermidine/spermine synthasesInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR035246DomainSpermidine synthase, tetramerisation domainInterproscan
IPR030374DomainPolyamine biosynthesis domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10578S -2-HYDROXY-ACID OXIDASE-RELATEDInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11558SPERMIDINE/SPERMINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0010181Molecular FunctionFMN bindingInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11517HAO; (S)-2-hydroxy-acid oxidaseEC:1.1.3.15
Peroxisomeko04146deepkoala

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