Gene detail

Detailed information of Aala_g892.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_022179893.1, zinc finger MYM-type protein 1-like [Myzus persicae]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q80WQ9	Zinc finger BED domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zbed4 PE=2 SV=1
Q8IZ13	Protein FAM200C OS=Homo sapiens OX=9606 GN=FAM200C PE=1 SV=1
A4Z945	Protein FAM200C OS=Bos taurus OX=9913 GN=FAM200C PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-BED
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13358	DDE_3	DDE superfamily endonuclease	Domain	Interproscan
PF09789	CC149	Coiled-coil domain-containing protein 149-A	Coiled-coil	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF02892	zf-BED	BED zinc finger	Domain	Interproscan
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038717	Domain	Tc1-like transposase, DDE domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR019179	Family	Coiled-coil domain-containing protein 149-A	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR027124	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR014010	Domain	REJ domain	Interproscan
IPR003656	Domain	Zinc finger, BED-type	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR052717	Family	Vacuolar processing and transposase activity regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21682	UNCHARACTERIZED	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR23227	BUCENTAUR RELATED	Interproscan
PTHR46169	DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09282	HMGA1; high mobility group AT-hook protein 1	-	Viral proteins	ko03200	deepkoala
			Ubiquitin system	ko04121	deepkoala
			Chromosome and associated proteins	ko03036	deepkoala