Detailed information of Aala_g893.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_001638856.1, sodium/calcium exchanger 1 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P48766Sodium/calcium exchanger 1 OS=Cavia porcellus OX=10141 GN=SLC8A1 PE=2 SV=1
P32418Sodium/calcium exchanger 1 OS=Homo sapiens OX=9606 GN=SLC8A1 PE=1 SV=3
P70414Sodium/calcium exchanger 1 OS=Mus musculus OX=10090 GN=Slc8a1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF01699Na_Ca_exSodium/calcium exchanger proteinFamilyInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR004837DomainSodium/calcium exchanger membrane regionInterproscan
IPR004836FamilySodium/calcium exchanger proteinInterproscan
IPR044880Homologous_superfamilyNCX, central ion-binding domain superfamilyInterproscan
IPR051171FamilyCalcium/Cation AntiporterInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR005819FamilyLinker histone H1/H5Interproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11824VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNITInterproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR11878SODIUM/CALCIUM EXCHANGERInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005432Molecular Functioncalcium:sodium antiporter activityInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015491Molecular Functionobsolete cation:cation antiporter activityInterproscan
GO:0030001Biological Processmetal ion transportInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0042383Cellular ComponentsarcolemmaInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0098794Cellular ComponentpostsynapseInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan

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