Detailed information of Aala_g902.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG1681055.1, DNA replication licensing factor MCM5 [Nymphon striatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O42398Voltage-dependent L-type calcium channel subunit alpha-1S (Fragment) OS=Gallus gallus OX=9031 GN=CACNA1S PE=2 SV=1
Q25452Muscle calcium channel subunit alpha-1 OS=Musca domestica OX=7370 PE=2 SV=1
Q02485Voltage-dependent L-type calcium channel subunit alpha-1S OS=Rattus norvegicus OX=10116 GN=Cacna1s PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01204TrehalaseTrehalaseRepeatInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF14214Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR018232Conserved_siteGlycoside hydrolase, family 37, conserved siteInterproscan
IPR001661FamilyGlycoside hydrolase, family 37Interproscan
IPR008928Homologous_superfamilySix-hairpin glycosidase superfamilyInterproscan
IPR012341Homologous_superfamilySix-hairpin glycosidase-like superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR050599FamilyVoltage-dependent calcium channel alpha-1 subunitInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR025476DomainHelitron helicase-like domainInterproscan
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR23403TREHALASEInterproscan
PTHR45628VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1Interproscan
PTHR45786DNA BINDING PROTEIN-LIKEInterproscan
PTHR48209AGL056WPInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004555Molecular Functionalpha,alpha-trehalase activityInterproscan
GO:0005991Biological Processtrehalose metabolic processInterproscan
GO:0005993Biological Processtrehalose catabolic processInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005891Cellular Componentvoltage-gated calcium channel complexInterproscan
GO:0008331Molecular Functionhigh voltage-gated calcium channel activityInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01194TREH, treA, treF; alpha,alpha-trehalaseEC:3.2.1.28
Glycosylphosphatidylinositol (GPI)-anchored proteinsko00537deepkoala

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