Detailed information of Aala_g904.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG7262723.1, hypothetical protein CRUP_006548, partial [Coryphaenoides rupestris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6P3J5Elongation factor 2b OS=Danio rerio OX=7955 GN=eef2b PE=1 SV=1
Q3SYU2Elongation factor 2 OS=Bos taurus OX=9913 GN=EEF2 PE=2 SV=3
Q90705Elongation factor 2 OS=Gallus gallus OX=9031 GN=EEF2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan
PF00403HMAHeavy-metal-associated domainDomainInterproscan
PF12777MTMicrotubule-binding stalk of dynein motorDomainInterproscan
PF12781AAA_9ATP-binding dynein motor regionDomainInterproscan
PF04931DNA_pol_phiDNA polymerase phiFamilyInterproscan
PF01131Topoisom_bacDNA topoisomeraseFamilyInterproscan
PF01751ToprimToprim domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR031157Conserved_siteTr-type G domain, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR006121DomainHeavy metal-associated domain, HMAInterproscan
IPR036163Homologous_superfamilyHeavy metal-associated domain superfamilyInterproscan
IPR016617FamilyArmadillo repeat-containing protein 1Interproscan
IPR052343FamilyDiverse Retrotransposon and Effector-Associated ProteinInterproscan
IPR024743DomainDynein heavy chain, coiled coil stalkInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR035706DomainDynein heavy chain, ATP-binding dynein motor regionInterproscan
IPR007015FamilyDNA polymerase V/Myb-binding protein 1AInterproscan
IPR013825Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 2Interproscan
IPR000380FamilyDNA topoisomerase, type IAInterproscan
IPR013497DomainDNA topoisomerase, type IA, centralInterproscan
IPR023405Homologous_superfamilyDNA topoisomerase, type IA, core domainInterproscan
IPR023406Active_siteDNA topoisomerase, type IA, active siteInterproscan
IPR013826Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 3Interproscan
IPR013824Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 1Interproscan
IPR003602DomainDNA topoisomerase, type IA, DNA-binding domainInterproscan
IPR006171DomainTOPRIM domainInterproscan
IPR003601DomainDNA topoisomerase, type IA, domain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11537VOLTAGE-GATED POTASSIUM CHANNELInterproscan
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR42908TRANSLATION ELONGATION FACTOR-RELATEDInterproscan
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan
PTHR46840ARMADILLO REPEAT-CONTAINING PROTEIN 1Interproscan
PTHR46890NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATEDInterproscan
PTHR46961DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEINInterproscan
PTHR34415PEPTIDASEInterproscan
PTHR11390PROKARYOTIC DNA TOPOISOMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0005251Molecular Functiondelayed rectifier potassium channel activityInterproscan
GO:0008076Cellular Componentvoltage-gated potassium channel complexInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006414Biological Processtranslational elongationInterproscan
GO:0043022Molecular Functionribosome bindingInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0007508Biological Processlarval heart developmentInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0061343Biological Processcell adhesion involved in heart morphogenesisInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0003916Molecular FunctionDNA topoisomerase activityInterproscan
GO:0003917Molecular FunctionDNA topoisomerase type I (single strand cut, ATP-independent) activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006265Biological ProcessDNA topological changeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10887DCLRE1C, ARTEMIS, SCIDA; DNA cross-link repair 1C proteinEC:3.1.-.-
DNA repair and recombination proteinsko03400deepkoala

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