Detailed information of Aala_g919.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI6650015.1, Zinc finger protein [Oopsacas minuta]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6R2W3SCAN domain-containing protein 3 OS=Homo sapiens OX=9606 GN=SCAND3 PE=1 SV=1
P14184Lipopolysaccharide cholinephosphotransferase LicD OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=licD PE=3 SV=2
Q9ZCN4Uncharacterized protein RP689 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=RP689 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04991LicDLicD familyDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF16565MIT_CPhospholipase D-like domain at C-terminus of MITDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR052942FamilyLipopolysaccharide cholinephosphotransferaseInterproscan
IPR007074FamilyLicD familyInterproscan
IPR043458FamilyG-protein coupled receptor 158/179Interproscan
IPR038028FamilyNucleosome-remodeling factor subunit BPTFInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR038113Homologous_superfamilyMITD1, C-terminal phospholipase D-like domain superfamilyInterproscan
IPR052817FamilyMIT domain-containing protein 1Interproscan
IPR032341DomainMITD1, C-terminal phospholipase D-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR014010DomainREJ domainInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR43404LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICDInterproscan
PTHR32546G-PROTEIN COUPLED RECEPTOR 158-RELATEDInterproscan
PTHR45975NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTFInterproscan
PTHR21222UNCHARACTERIZEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016589Cellular ComponentNURF complexInterproscan
GO:0035064Molecular Functionmethylated histone bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

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