Detailed information of Aala_g930.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_035658037.1, uncharacterized protein LOC118403431 [Branchiostoma floridae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21329RNA-directed DNA polymerase from mobile element jockey OS=Drosophila funebris OX=7221 GN=jockeypol PE=1 SV=1
P21328RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1
Q9ERU9E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00638Ran_BP1RanBP1 domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR045255FamilyRan binding protein RanBP1-likeInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR000156DomainRan binding domainInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR23138RAN BINDING PROTEINInterproscan
PTHR33064POL PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0046907Biological Processintracellular transportInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19151ibsC; small toxic protein IbsC-DNA repair and recombination proteinsko03400deepkoala
Prokaryotic defense systemko02048deepkoala

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