Detailed information of Aala_g935.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4023999.1, Hypothetical predicted protein [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D6WIX5Calcium uniporter protein, mitochondrial OS=Tribolium castaneum OX=7070 GN=MCU PE=1 SV=3
Q3UMR5Calcium uniporter protein, mitochondrial OS=Mus musculus OX=10090 GN=Mcu PE=1 SV=2
Q8NE86Calcium uniporter protein, mitochondrial OS=Homo sapiens OX=9606 GN=MCU PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13489Methyltransf_23Methyltransferase domainDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR036052Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR050214FamilyCysteine Synthase/Cystathionine Beta-SynthaseInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR026113FamilytRNA N(3)-methylcytidine methyltransferase METTL2/6/8-likeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR017072FamilyTranscription elongation factor Spt6Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10314CYSTATHIONINE BETA-SYNTHASEInterproscan
PTHR22809METHYLTRANSFERASE-RELATEDInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR10145TRANSCRIPTION ELONGATION FACTOR SPT6Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004122Molecular Functioncystathionine beta-synthase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006535Biological Processcysteine biosynthetic process from serineInterproscan
GO:0019344Biological Processcysteine biosynthetic processInterproscan
GO:0052735Molecular FunctiontRNA (cytidine-3-)-methyltransferase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0008023Cellular Componenttranscription elongation factor complexInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0034728Biological Processnucleosome organizationInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0140673Biological Processtranscription elongation-coupled chromatin remodelingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24974METTL2; tRNA N(3)-methylcytidine methyltransferase METTL2EC:2.1.1.-
Spliceosomeko03041deepkoala
Transfer RNA biogenesisko03016deepkoala

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