Detailed information of Aala_g937.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_001631563.2, copine-3 isoform X1 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O75131Copine-3 OS=Homo sapiens OX=9606 GN=CPNE3 PE=1 SV=1
Q8BT60Copine-3 OS=Mus musculus OX=10090 GN=Cpne3 PE=1 SV=2
Q96FN4Copine-2 OS=Homo sapiens OX=9606 GN=CPNE2 PE=1 SV=3
Gene familySubfamily
Transcription Factors FamilyMYB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07002CopineCopineFamilyInterproscan
PF02198SAM_PNTSterile alpha motif (SAM)/Pointed domainDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF18293Caprin-1_dimerCaprin-1 dimerization domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045052FamilyCopineInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR037768DomainCopine, C2B domainInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR010734DomainCopine, C-terminalInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR003118DomainPointed domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017884DomainSANT domainInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR041637DomainCaprin-1 dimerization domainInterproscan
IPR028816FamilyCaprinInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR051714FamilyCCHC-type Zinc Finger Nucleic Acid BindingInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR026983FamilyDynein heavy chainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10857COPINEInterproscan
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR22922GPI-ANCHORED PROTEIN P137Interproscan
PTHR23002ZINC FINGER CCHC DOMAIN CONTAINING PROTEINInterproscan
PTHR10676DYNEIN HEAVY CHAIN FAMILY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005544Molecular Functioncalcium-dependent phospholipid bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0071277Biological Processcellular response to calcium ionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0045182Molecular Functiontranslation regulator activityInterproscan
GO:2000767Biological Processpositive regulation of cytoplasmic translationInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0008569Molecular Functionminus-end-directed microtubule motor activityInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0060294Biological Processcilium movement involved in cell motilityInterproscan
GO:0097729Cellular Component9+2 motile ciliumInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24524CPNE1_2_3; copine 1/2/3-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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