Detailed information of Aala_g940.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAJ8729013.1, hypothetical protein PYW07_006709 [Mythimna separata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O75445Usherin OS=Homo sapiens OX=9606 GN=USH2A PE=1 SV=3
Q8K3K1Usherin OS=Rattus norvegicus OX=10116 GN=Ush2a PE=1 SV=2
Q2QI47Usherin OS=Mus musculus OX=10090 GN=Ush2A PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05786Cnd2Condensin complex subunit 2FamilyInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022816FamilyCondensin complex subunit 2/barrenInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR050713FamilyReceptor-type Tyrosine-protein Phosphatases/UshersInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR000366FamilyGPCR fungal pheromone mating factor, STE2Interproscan
IPR001734FamilySodium/solute symporterInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13108CONDENSIN COMPLEX SUBUNIT 2Interproscan
PTHR46957CYTOKINE RECEPTORInterproscan
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000796Cellular Componentcondensin complexInterproscan
GO:0007076Biological Processmitotic chromosome condensationInterproscan
GO:0000799Cellular Componentcondensin complexInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004932Molecular Functionmating-type factor pheromone receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

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