Detailed information of Aala_g950.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_044179414.1, receptor-type tyrosine-protein phosphatase F-like isoform X7 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8AV58Protein sidekick-1 OS=Gallus gallus OX=9031 GN=SDK1 PE=1 SV=1
B0V2N1Receptor-type tyrosine-protein phosphatase S OS=Mus musculus OX=10090 GN=Ptprs PE=1 SV=1
Q64605Receptor-type tyrosine-protein phosphatase S OS=Rattus norvegicus OX=10116 GN=Ptprs PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF06984MRP-L47Mitochondrial 39-S ribosomal protein L47 (MRP-L47)FamilyInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR010729FamilyLarge ribosomal subunit protein uL29m, mitochondrialInterproscan
IPR038340Homologous_superfamilyMRP-L47 superfamily, mitochondrialInterproscan
IPR028001FamilyStabilizer of axonemal microtubules 5Interproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR045110FamilyXMAP215Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR44170PROTEIN SIDEKICKInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR21183RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATEDInterproscan
PTHR34828TESTIS-EXPRESSED PROTEIN 45Interproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR12609MICROTUBULE ASSOCIATED PROTEIN XMAP215Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005761Cellular Componentmitochondrial ribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0005762Cellular Componentmitochondrial large ribosomal subunitInterproscan
GO:0032543Biological Processmitochondrial translationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0000776Cellular ComponentkinetochoreInterproscan
GO:0000922Cellular Componentspindle poleInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0007051Biological Processspindle organizationInterproscan
GO:0007052Biological Processmitotic spindle organizationInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0030951Biological Processestablishment or maintenance of microtubule cytoskeleton polarityInterproscan
GO:0035371Cellular Componentmicrotubule plus-endInterproscan
GO:0046785Biological Processmicrotubule polymerizationInterproscan
GO:0051010Molecular Functionmicrotubule plus-end bindingInterproscan
GO:0051298Biological Processcentrosome duplicationInterproscan
GO:0061863Molecular Functionmicrotubule plus end polymeraseInterproscan

TOP