Detailed information of Aala_g953.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_002165475.2, programmed cell death protein 4 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q98TX3Programmed cell death protein 4 OS=Gallus gallus OX=9031 GN=PDCD4 PE=2 SV=1
Q9JID1Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2
Q61823Programmed cell death protein 4 OS=Mus musculus OX=10090 GN=Pdcd4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF02847MA3MA3 domainRepeatInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF09785Prp31_CPrp31 C terminal domainFamilyInterproscan
PF01798NopsnoRNA binding domain, fibrillarinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR052076FamilyTransient receptor potential cation channelInterproscan
IPR005821DomainIon transport domainInterproscan
IPR005819FamilyLinker histone H1/H5Interproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR003891DomainInitiation factor eIF-4 gamma, MA3Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR039778FamilyProgrammed cell death protein 4Interproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR051221FamilyLow-density lipoprotein receptor-relatedInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR036070Homologous_superfamilyNop domain superfamilyInterproscan
IPR002687DomainNop domainInterproscan
IPR019175DomainPrp31 C-terminalInterproscan
IPR042239Homologous_superfamilyNop, C-terminal domainInterproscan
IPR027105FamilyU4/U6 small nuclear ribonucleoprotein Prp31Interproscan
IPR012976DomainNOSICInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24241NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTORInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47143TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESSInterproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan
PTHR12626PROGRAMMED CELL DEATH 4Interproscan
PTHR22722LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATEDInterproscan
PTHR13904PRE-MRNA SPLICING FACTOR PRP31Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0032870Biological Processcellular response to hormone stimulusInterproscan
GO:0042277Molecular Functionpeptide bindingInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006898Biological Processreceptor-mediated endocytosisInterproscan
GO:0016324Cellular Componentapical plasma membraneInterproscan
GO:0042562Molecular Functionhormone bindingInterproscan
GO:0043235Cellular Componentreceptor complexInterproscan
GO:0000244Biological Processspliceosomal tri-snRNP complex assemblyInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005687Cellular ComponentU4 snRNPInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0097526Cellular Componentspliceosomal tri-snRNP complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25737SMIM31; small integral membrane protein 31-Spliceosomeko03041deepkoala
Signaling proteins-deepkoala

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