Gene detail

Detailed information of Aala_g966.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_030044942.1, uncharacterized protein LOC115459228 [Microcaecilia unicolor]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q8BML2	O-acyltransferase like protein OS=Mus musculus OX=10090 GN=Oacyl PE=2 SV=1
Q7JR49	V-type proton ATPase subunit S1 OS=Drosophila melanogaster OX=7227 GN=VhaAC45 PE=1 SV=1
C8YR32	Lipoxygenase homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Loxhd1 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	CSD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01477	PLAT	PLAT/LH2 domain	Domain	Interproscan
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00313	CSD	'Cold-shock' DNA-binding domain	Domain	Interproscan
PF20520	Ac45-VOA1_TM	V0 complex accessory subunit Ac45/VOA1 transmembrane domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001024	Domain	PLAT/LH2 domain	Interproscan
IPR052970	Family	Inner ear hair cell lipoxygenase homology domain-containing protein	Interproscan
IPR036392	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan
IPR052728	Family	Oxygen and lipid transport regulator	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR019844	Domain	Cold-shock (CSD) domain	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR002059	Domain	Cold-shock protein, DNA-binding	Interproscan
IPR050181	Family	Cold shock domain-containing protein	Interproscan
IPR011129	Domain	Cold shock domain	Interproscan
IPR008388	Family	V0 complex accessory subunit Ac45	Interproscan
IPR046756	Domain	V-type proton ATPase subunit S1/VOA1, transmembrane domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR45901	PROTEIN CBG12474	Interproscan
PTHR11161	O-ACYLTRANSFERASE	Interproscan
PTHR45749	-	Interproscan
PTHR11544	COLD SHOCK DOMAIN CONTAINING PROTEINS	Interproscan
PTHR12471	VACUOLAR ATP SYNTHASE SUBUNIT S1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0010468	Biological Process	regulation of gene expression	Interproscan